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50 µm50 µmHGSOC · TME SCHEMATICBIOLOGICAL EVIDENCE PIPELINESPECIMEN / ASSAY / SPATIAL ANALYSIS / COHORT VALIDATIONTISSUEMULTIPLEXSPATIAL MODELVALIDATIONCHROMOSOME 17BRCA1 / 17Q21.31BRCA1PQB-DNARIGHT-HANDED / 10.5 BP PER TURN3.4 NM / TURNHGSOC HISTOARCHITECTUREPAPILLARY-SOLID GROWTH / SLIT-LIKE SPACES100 UMHOMOLOGOUS RECOMBINATIONDOUBLE-STRAND BREAK / BRCA1-BRCA2 / RAD51DSBEND RESECTIONBRCA1BRCA2 / RAD51STRAND INVASIONSPATIAL PHENOTYPINGCELL-RESOLVED MULTIPLEX FIELD100 UMBIOLOGICAL EVIDENCE PIPELINESPECIMEN / ASSAY / SPATIAL ANALYSIS / COHORT VALIDATIONTISSUEMULTIPLEXSPATIAL MODELVALIDATIONB-DNARIGHT-HANDED / 10.5 BP PER TURN3.4 NM / TURN

Research Publications

Showing highlighted publications. Use the PubMed link below to browse the complete publication record.

Featured Publications

See all publications on PubMedSee all on PubMed↗
CD2025
Journal
Cancer discovery
Publisher
American Association for Cancer Research (AACR)
Date
Feb 9, 2026
PMID
41661089
DOI
10.1158/2159-8290.CD-25-1492

Single-cell spatial atlas of high-grade serous ovarian cancer uncovers MHC class II as a key predictor of spatial tumor ecosystems and clinical outcomes

Authors: Perez-Villatoro F, Shabanova A, van Wagensveld L, Junquera A, Niemiec I, Hincapié-Otero MM, Kang Z, Falco MM, Birgin K, Wolf S +25 authors

View on PubMed →Open DOI ↗
CIR2025
Journal
Cancer immunology research
Publisher
American Association for Cancer Research (AACR)
Date
Apr 2, 2026
PMID
41563843
DOI
10.1158/2326-6066.CIR-25-0743

Ex Vivo Immuno-Oncology Platform Reveals Spatial T-cell Infiltration Patterns Linked to ATR Inhibition Responses in High-Grade Serous Ovarian Cancer

Authors: Sakrepatna Nagaraj A, Salko M, Sirsikar A, Kang Z, Erkan EP, Pietilä EA, Niemiec I, Bao J, Marchi G, Szabó A +18 authors

View on PubMed →Open DOI ↗
Bioinformatics2025
Journal
Bioinformatics (Oxford, England)
Publisher
Oxford University Press (OUP)
Date
Mar 4, 2025
PMID
39982403
DOI
10.1093/bioinformatics/btaf082

Tribus: semi-automated discovery of cell identities and phenotypes from multiplexed imaging and proteomic data

Authors: Kang Z, Szabo A, Farago T, Perez-Villatoro F, Junquera A, Shah S, Launonen IM, Anttila E, Casado J, Elias K +3 authors

View on PubMed →Open DOI ↗
Cancer Cell2024
Journal
Cancer cell
Publisher
Cell Press (Elsevier)
Date
Dec 9, 2024
PMID
39658541
DOI
10.1016/j.ccell.2024.11.005

Chemotherapy induces myeloid-driven spatially confined T cell exhaustion in ovarian cancer

Authors: Launonen IM, Niemiec I, Hincapié-Otero M, Erkan EP, Junquera A, Afenteva D, Falco MM, Liang Z, Salko M, Chamchougia F +16 authors

View on PubMed →Open DOI ↗
NPJ2022
Journal
NPJ precision oncology
Publisher
Springer Nature
Date
Dec 29, 2022
PMID
36581696
DOI
10.1038/s41698-022-00339-8

Optimized detection of homologous recombination deficiency improves the prediction of clinical outcomes in cancer

Authors: Perez-Villatoro F, Oikkonen J, Casado J, Chernenko A, Gulhan DC, Tumiati M, Li Y, Lavikka K, Hietanen S, Hynninen J +7 authors

View on PubMed →Open DOI ↗
See all publications on PubMed ↗
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Advancing precision oncology through spatial biology research

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  • Home›
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